RNA sequences with modifications
|
Previous page |
sequences 1 to 20 of 66 |
Next page |
Display all |
|
|
|
|
|
|
|
|
accept| | D-domain ||anticodon domain || variable region || T-domain ||accep| |
|
|
|
|
|
|
10| 20| 30| 40| 50| 60| 70| |
|
Type | aa type | Codon | Organism | Organellum | 0123456789012345677890001234567890123456789012345eeeeeeeeeeeeeeeeeee6789012345678901234567890123456 |
| tRNA | Ala1 | AGC | Saccharomyces cerevisiae | cytosolic |
-GGGCGUGUKGCGUAGDC-GGD--AGCGCRCUCCCUUIGCOPGGGAGAG-------------------GDCUCCGGTPCGAUUCCGGACUCGUCCACCA |
| tRNA | Ala2 | UGC | Saccharomyces cerevisiae | cytosolic |
-GGGCACAUKGCGCAGDD-GGD--AGCGCRCUUCCCUUGCAAGGAAGAG-------------------GDCAUCGGTPCGAUUCCGGUUGCGUCCACCA |
| tRNA | Arg1 | UCU | Saccharomyces cerevisiae | cytosolic |
-GCUCGCGUKLCGUAAD--GGC--AACGCRPCUGACU1CU6APCAGAAG-------------------ADUAUGGGTPCG"CCCCCAUCGUGAGUGCCA |
| tRNA | Arg2 | GCG | Saccharomyces cerevisiae | cytosolic |
-PUCCUCGUKLCCCAAD--GGDC-ACGGCRPCUGGCUICGAACCAGAAG-------------------ADU?CAGGTPCA"GUCCUGGCGGGGAAGCCA |
| tRNA | Arg3 | CCU | Saccharomyces cerevisiae | cytosolic |
-GUUCCGUUKGCGUAAD--GGD--AACGCRUCUCCCUCCU6AGGAGAAG-------------------ACDGCGGGTPCGAGUCCCGUACGGAACGCCA |
| tRNA | Asn1 | GUU | Saccharomyces cerevisiae | cytosolic |
-GACUCCAUGLCCAAGDD-GGDD-AAGGCRUGCGACUGUU6APCGCAAG-------------------AD?GUGAGTPCA"CCCUCACUGGGGUCGCCA |
| tRNA | Asp1 | GUC | Saccharomyces cerevisiae | cytosolic |
-UCCGUGAUAGUUPAAD--GGDC-AGAAUGGGCGCPUGUCKCGUGCCAG-------------------A-U?GGGGTPCAAUUCCCCGUCGCGGAGCCA |
| tRNA | Cys1 | GCA | Saccharomyces cerevisiae | cytosolic |
-GCUCGUAUGGCGCAGD--GGD--AGCGCAGCAGAPUGCA+APCUGUUG-------------------7D?CUUAGTPCG"UCCUGAGUGCGAGCUCCA |
| tRNA | Gln1 | UUG | Saccharomyces cerevisiae | cytosolic |
-GGUCCUAUAGUGUAGD--GGDD-AUCACUUUCGGPUUUGAPCCGGACA-------------------A-C?CCGGTPCGAAUCCGGGUAGGACCUCCA |
| tRNA | Gln2 | CUG | Saccharomyces cerevisiae | cytosolic |
-GGUCCUAUAGUGUAGD--GGDD-AUCACUUUCGGPUCUGAPCCGAACA-------------------A-C?CCAGTPCGAAUCCGGGUGGGACC.XCA |
| tRNA | Glu1 | UUC | Saccharomyces cerevisiae | cytosolic |
-UCCGAUAUAGUGPAAC--GGCD-AUCACAPCACGCU3UCACCGUGGAG-------------------A-C?GGGGTPCGACUCCCCGUAUCGGAGCCA |
| tRNA | Glu2 | CUC | Saccharomyces cerevisiae | cytosolic |
-UCCGAUGUAGUGPAAC--GGCD-AUCACAPCACGUUCUCACCGUGGAG-------------------A-C?GGGGTPCGACUCCCCGCUUCGGAGCCA |
| tRNA | Gly1 | GCC | Saccharomyces cerevisiae | cytosolic |
-GCGBAAGUKGUUPAGD--GGD--AAAAUCCAACGPUGCCAPCGUUGGG-------------------C-C?CCGGTPCGAUUCCGGGCUUGCGCACCA |
| tRNA | Gly2 | UCC | Saccharomyces cerevisiae | cytosolic |
-GGGCGGUUAGUGPAGD--GGDD-AUCAUCCCACCCUNCCAAGGUGGGG-------------------A-CACGGGTPCGAUUCUCGUACCGCUCACCA |
| tRNA | His1 | GUG | Saccharomyces cerevisiae | cytosolic |
GGCCHUCUUAGUAPAGD--#GDD-AGUACACAACAPUGUGKCPGUUGAA-------------------A-C?CUGGTPCGAUUCUAGGAGGUGGCACCA |
| tRNA | His2 | GUG | Saccharomyces cerevisiae | cytosolic |
GGCCHUCUUAGUAPAGD--#GDD-AGUACACAUCGPUGUGKCCGAUGAA-------------------A-C?CUGGTPCGAUUCUAGGAGAUGGCACCA |
| tRNA | Ile1 | AAU | Saccharomyces cerevisiae | cytosolic |
-GGUCUCUUKLCCCAGDD-GGDD-AAGGCACCGUGCUIAU6ACGCGGGG-------------------AD?AGCGGTPCG"UCCCGCUAGAGACCACCA |
| tRNA | Ile2 | UAU | Saccharomyces cerevisiae | cytosolic |
-GCUCGUGUALCUCAGU--GGDD-AGAGCUPCGUGCUPAP6ACGCGACC-------------------7D?GUGGGTPCA"UCCCCACCPCGAGCACCA |
| tRNA | Ile3 | UAU | Saccharomyces cerevisiae | cytosolic |
-GCUCGUGUALCUCAGU--GGDD-AGAGCUPCGUGCUPAP6ACGCGACC-------------------7D?GUGGGTPCA"ACCCCACCPCGAGCACCA |
| tRNA | Leu1 | UAG | Saccharomyces cerevisiae | cytosolic |
-GGGAGUUUGLCMGAGD--#GDDDAAGGCRPCAGAPUUAGKCPCUGAU-AUC----UUCG-----GAUG-?AAGGGTPCG"AUCCCUUAGCUCUCACCA |
Explanation: The numbering scheme is based on the E.coli sequences. Helical regions are colored in red, loop and bulge regions in black. Modified bases are underlined and hyperlinked.
|
