Proteins involved in RNA modification

One-letter and colors for RNA types
tRNA t
mRNA m
SSU rRNA s
LSU rRNA l
snRNA n
other name of the type

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Traditional Name Full name Synonym GI Orf
COG UniProt Structures (PDB id) Position | Modification type Complex
Enzyme Type Organism
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Traditional Name Full name Synonym GI Orf COG UniProt Structures (PDB id)

Position

Modification
type

Complex Enzyme Type Organism
Ceg1 GTP-RNA guanylyltransferase GTase, Mce1 1322697 CEG1 COG5226 Q01159 3KYH
m:0 m7Gpp(pN)
guanylyltransferase Saccharomyces cerevisiae
Cet1 RNA triphosphatase Cet1 Polynucleotide 5'-triphosphatase, mRNA 5'-triphosphatase, Tpase 308153424 P1433 COG4943 O13297 1D8HA, 1D8HB, 1D8HC, 1D8IA, 1D8IB, 1D8IC
m:0 m7Gpp(pN)
triphosphatase/hydrolase Saccharomyces cerevisiae
Cfr Ribosomal RNA large subunit methyltransferase Cfr pSCFS1 75466541 COG0820 Q9FBG4
l:2503(2503) m2,8A
l:2503(2503) m8A
methyltransferase Staphylococcus sciuri
Cgi121 MJ0187 15668359 COG1617 Q57646 2K8Y, 3ENH
t:37 t6A
EKC/KEOPS pseudouridine synthase Methanocaldococcus jannaschii
Cgi121 YML036w 154199620 COG1617 Q03705
t:37 t6A
EKC/KEOPS pseudouridine synthase Saccharomyces cerevisiae
CmoA tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase YecO 3025151 b1870 COG2226 P76290 4GEK, 4IWN
t:34 cmo5U
t:34 mcmo5U
methyltransferase Escherichia coli
CmoA tRNA (cmo5U34)-methyltransferase YecO 16272273 COG2226 P43985 1IM8
t:34 cmo5U
methyltransferase Haemophilus influenzae
CmoB tRNA 5-methoxyuridine(34) synthase YecP 3025152 b1871 COG2230 P76291 4QNX,4QNU,4QNV
t:34 cmo5U
t:34 mcmo5U
carboxymethyltransferase Escherichia coli
Dcp2 RNA decapping complex subunit 2 74675930 dcp2 COG0494 O13828 2A6T
hydrolase Schizosaccharomyces pombe
DcpS Scavenger mRNA-decapping enzyme DcpS DCS-1, Hint-related 7meGMP-directed hydrolase, HINT5 116241325 HSPC015 COG5075 Q96C86 1ST0, 1ST4, 1XML, 1XMM
hydrolase Homo sapiens
Dnmt2 tRNA (cytosine(38)-C(5))-methyltransferase 4758184 TRDMT1 COG0270 O14717 1G55
t:38 m5C
methyltransferase Homo sapiens
Dnmt2 tRNA (cytosine(38)-C(5))-methyltransferase GSU0227 39995337 Q74GL9
t:38 m5C
methyltransferase Geobacter sulfurreducens
Dus1 tRNA-dihydrouridine synthase 1 1730621 YML080W COG0042 P53759
t:16 D
t:17 D
dihydrouridine synthase Saccharomyces cerevisiae
Dus2 tRNA-dihydrouridine synthase 2 Smm1p 1730664 YNR015W COG0042 P53720
t:20 D
dihydrouridine synthase Saccharomyces cerevisiae
Dus2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like DUS2L 8923374 COG0042 Q9NX74 4WFS,4WFT
dihydrouridine synthase Homo sapiens
Dus3 tRNA-dihydrouridine synthase 3 547573 YLR401C Q06053
t:47 D
dihydrouridine synthase Saccharomyces cerevisiae
Dus4 tRNA-dihydrouridine synthase 4 2833204 YLR405W, L8084.2 COG0042 Q06063
t:20a D
t:20b D
dihydrouridine synthase Saccharomyces cerevisiae
DusA tRNA dihydrouridine synthase A YjbN 3183570 yjbN, b4049 COG0042 P32695
t:20 D
dihydrouridine synthase Escherichia coli
DusB tRNA dihydrouridine synthase B YhdG 78100051 yhdG,b3260 COG0042 P0ABT5
t:16 D
t:20 D
t:20a D
t:17 D
dihydrouridine synthase Escherichia coli
DusC tRNA dihydrouridine synthase C YohI 466094 yohI, b2140 COG0042 P33371 3w9z
t:20 D
t:20a D
t:16 D
t:17 D
dihydrouridine synthase Escherichia coli