Proteins involved in RNA modification

One-letter and colors for RNA types
tRNA t
mRNA m
SSU rRNA s
LSU rRNA l
snRNA n
other name of the type

Show/hide columns:
Traditional Name Full name Synonym GI Orf
COG UniProt Structures (PDB id) Position | Modification type Complex
Enzyme Type Organism
Displaying 20 proteins per page. To display all proteins use:

Traditional Name Full name Synonym GI Orf COG UniProt Structures (PDB id)

Position

Modification
type

Complex Enzyme Type Organism
15.5kD Ribosomal protein L7Ae 159111753 GL50803_11287 COG1358 A8BMJ0 3O85
C/D RNP Giardia lamblia
ALKBH5 ABH5, OFOXD1 148539642 Q6P6C2 4NJ4, 4NRM, 4NRO, 4NRP, 4NRQ, 4O7X, 4OCT, 4O61
m:many A
demethylase Homo sapiens
ALKBH8 Alkylated DNA repair protein alkB homolog 8 ABH8 189027650 COG3145 Q96BT7 3THT, 3THP
t:34 mchm5U
t:34 mcm5s2U
t:34 mcm5U
t:34 mcm5Um
ALKBH8/TRM112 methyltransferase, hydroxylase Homo sapiens
Abd1 RNA cap guanine-N7 methyltransferase MceS 416567 YBR1602 COG2226 P32783
m:0 m7Gpp(pN)
methyltransferase Saccharomyces cerevisiae
ArcS glutamine:preQ0-tRNA amidinotransferase or Archaeosine Synthase Archaeosine synthase, Glutamine:preQ0-tRNA amidinotransferase 3024970 COG1549 Q58428
t:15 G+
amidinotransferase Methanocaldococcus jannaschii
ArcTGT Archaeosine tRNA-guanine transglycosylase None
t:13 G+
t:15 G+
transglycosylase Thermoplasma acidophilum
ArmA rRNA adenine N-7-methyltransferase aminoglycoside resistance 16S rRNA methyltransferase 124021052 armA COG2813 Q6F5A0 3FZG
s:1405(1405) m7G
methyltransferase Escherichia coli
AviRa rRNA guanine N-1-methyltransferase avilamycin resistance 23S rRNA methyltransferase 28380397 aviRa COG1041 Q9F5K5 1O9G, 1O9H
l:2535(2535) m1G
methyltransferase Streptomyces viridochromogenes
AviRb rRNA (uridine-2'-O-)-methyltransferase avilamycin resistance 23S rRNA methyltransferase 60593969 aviRb COG0566 Q9F5K6 1X7O, 1X7P
l:2479(2479) Um
methyltransferase Streptomyces viridochromogenes
BCDIN3 RNA cap gamma-methyltransferase 7SK snRNA methylphosphate capping enzyme (MePCE), Bicoid-interacting protein 3 homolog 74758999 MEPCE COG2264 Q7L2J0
n:0 m7Gpp(pN)
methyltransferase Homo sapiens
BCDIN3D BCDIN3 domain containing 32171233 Q7Z5W3
pre-miRNA:0 mm(pN)
methyltransferase Homo sapiens
Bmt2 YBR141C 330443457 YBR1118 P38278
l:2142(1784) m1A
methyltransferase Saccharomyces cerevisiae
Bmt5 6322095 YIL096C P40493
l:2634(2265) m3U
methyltransferase Saccharomyces cerevisiae
Bmt6 YLR063W 6323092 L2174 Q12291
l:2843(2474) m3U
methyltransferase Saccharomyces cerevisiae
Bud23 Bud23 140499 YCR47C COG2230 P25627
s:1575(1338) m7G
methyltransferase Saccharomyces cerevisiae
Bud32 Serine/threonine-protein kinase BUD32 PRPK, LDB14, YGR262c 6321701 COG3642 P53323
t:37 t6A
EKC/KEOPS kinase Saccharomyces cerevisiae
CDAT8 tRNA-specific cytidine deaminase MK0935 238537840 COG2131 Q8TWU6 3G8Q
t:8 U
deaminase Methanopyrus kandleri
CMTr1 cap methyltranferase 1 hMTr1, FTSJD2, KIAA0082 74750894 FTSJD2, KIAA0082 COG0293 Q8N1G2
n:1 m7GpppNm
m:1 m7GpppNm
methyltransferase Homo sapiens
CMTr2 cap methyltranferase 2 hMTr2, FTSJD1, FLJ11171 269849596 FTSJD1, FLJ11171 COG0293 Q8IYT2
n:2 m7GpppNmNm
m:2 m7GpppNmNm
methyltransferase Homo sapiens
Cbf5 H/ACA ribonucleoprotein complex subunit 4 dyskerine 461698 YLR175W COG0130 P33322 3UAI, 3U28
t:many Y
s:many Y
l:many Y
n:many Y
H/ACA RNP pseudouridine synthase Saccharomyces cerevisiae