Modification Summary

5-aminomethyl-2-thiouridine

[show modification pathway]
nm5s2U

Summary

Full name5-aminomethyl-2-thiouridine
Short namenm5s2U
New Nomenclature2510U
RNAMods abbreviation
HTML abbreviation
Enzymes MnmCD (Escherichia coli)
Mtu1 (Saccharomyces cerevisiae)
TrmU (Homo sapiens)
MnmE (Escherichia coli)
MnmE (Chlorobium tepidum)
MnmE (Nostoc sp.)
MnmE (Thermotoga maritima)
MnmG (Escherichia coli)
MnmG (Chlorobium tepidum)
MnmG (Aquifex aeolicus)
Found in phylogenyEubacteria, Eukaryota
Found in RNA
SMILES codeNCC1=CN(C(=S)NC1=O)[C@@H]2O[C@H](CO)[C@H](O)C2O

LC-MS Informations

Sum formulaC10O5N3H15S1
Monoisotopic mass289.073241
Average mass289.311088
HRMS mass289.072692
Normalized LC elution time * not available
LC elution order/characteristics not available
Mass transition not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for nm5s2U]

Chemical groups contained

heavy atomsulfur
methyl groupmethyl at aromatic C
otherprimary amine

Reactions producing 5-aminomethyl-2-thiouridine

Name
cmnm5s2U:nm5s2U
nm5U:nm5s2U
s2U:nm5s2U

Reactions starting from 5-aminomethyl-2-thiouridine

Name
nm5s2U:nm5se2U
nm5s2U:mnm5s2U
nm5s2U:nm5ges2U
nm5s2U:inm5s2U

Last modification of this entry: 2013-05-10 16:36:56.141941
Edited by a user: magda
Edited content: Kingdom/s added to a modification