Modification Summary

5-aminomethyl-2-geranylthiouridine

[show modification pathway]
nm5ges2U

Summary

Full name5-aminomethyl-2-geranylthiouridine
Short namenm5ges2U
New Nomenclature21510U
RNAMods abbreviationΔ
HTML abbreviationΔ
Enzymes
Found in phylogeny
Found in RNA
SMILES codeC/C(C)=C\CCC(\C)=C\CSC1=NC(=O)C(CN)=CN1[C@@H]2O[C@H](CO)[C@H](O)C2O

LC-MS Information

Sum formulaC20H31N3O5S
Monoisotopic mass425.1984
Average mass425.5494
[M+H]+426.2062
Product ions294
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for nm5ges2U]

Chemical groups contained

aminoalkylaminomethyl
sulphurthio
hydrocarbongeranyl

Reactions producing 5-aminomethyl-2-geranylthiouridine

Name
ges2U:nm5ges2U
cmnm5ges2U:nm5ges2U
nm5s2U:nm5ges2U

Reactions starting from 5-aminomethyl-2-geranylthiouridine

Name
nm5ges2U:mnm5ges2U

Last modification of this entry: 2014-04-01 17:51:43.351934
Edited by a user: magda
Edited content: RNA type/s added to a modification