Modification Summary
5-aminomethyluridine
[show modification pathway]
Summary
| Full name | 5-aminomethyluridine |
| Short name | nm5U |
| New Nomenclature | 510U |
| RNAMods abbreviation | ∪ |
| HTML abbreviation | ∪ |
| Enzymes |
MnmCD (Escherichia coli) MnmE (Escherichia coli) MnmE (Chlorobium tepidum) MnmE (Nostoc sp.) MnmE (Thermotoga maritima) MnmG (Escherichia coli) MnmG (Chlorobium tepidum) MnmG (Aquifex aeolicus) |
| Found in phylogeny | Eubacteria, Eukaryota |
| Found in RNA | |
| SMILES code | C3(OC(CO)C(O)C(O)3)N1C=C(CN)C(=O)NC1(=O) |
LC-MS Information
| Sum formula | C10O6N3H15 |
| Monoisotopic mass | 273.096085 |
| Average mass | 273.246005 |
| HRMS mass | 273.095536 |
| Normalized LC elution time * | not available |
| LC elution order/characteristics | not available |
| Mass transition | not available |
* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.
Download [.mol file for nm5U]
Chemical groups contained
| methyl group | methyl at aromatic C |
| other | primary amine |
Reactions producing 5-aminomethyluridine
| Name |
|---|
| cmnm5U:nm5U |
| U:nm5U |
Reactions starting from 5-aminomethyluridine
| Name |
|---|
| nm5U:mnm5U |
| nm5U:nm5s2U |
| nm5U:inm5U |
Last modification of this entry: 2013-05-10 16:36:56.387610
Edited by a user: magda
Edited content: Kingdom/s added to a modification
