Modification Summary

5-carbamoylmethyl-2′-O-methyluridine

[show modification pathway]
ncm5Um

Summary

Full name5-carbamoylmethyl-2′-O-methyluridine
Short namencm5Um
New Nomenclature053U
RNAMods abbreviation~
HTML abbreviation
Enzymes Trm7 (Saccharomyces cerevisiae)
Found in phylogeny
Found in RNA
SMILES codeC3(OC(CO)C(O)C(O(C))3)N1C=C(CC(=O)N)C(=O)NC1(=O)

LC-MS Information

Sum formulaC12O7N3H17
Monoisotopic mass315.1066
Average mass315.2833
[M+H]+316.1144
Product ions170/153/125
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for ncm5Um]

Chemical groups contained

methyl groupmethyl at O2
methyl groupmethyl at aromatic C
othercarbamoyl

Reactions producing 5-carbamoylmethyl-2′-O-methyluridine

Name
ncm5U:ncm5Um

Last modification of this entry: 2017-10-06 19:55:41.916875
Edited by a user: pboccaletto
Edited content: Changed mass_prot and product_ions.