Modification Summary

2′-O-methyluridine 5-oxyacetic acid methyl ester

[show modification pathway]
mcmo5Um

Summary

Full name2′-O-methyluridine 5-oxyacetic acid methyl ester
Short namemcmo5Um
New Nomenclature0503U
RNAMods abbreviationϿ
HTML abbreviationϿ
Enzymes
Found in phylogeny
Found in RNA
SMILES codeCOC1[C@@H](O)[C@@H](CO)O[C@H]1N1C=C(OCC(=O)OC)C(=O)NC1=O

LC-MS Information

Sum formulaC13H18N2O9
Monoisotopic mass346.292
Average mass346.101230168
HRMS massNone
Normalized LC elution time * not available
LC elution order/characteristics not available
Mass transition not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for mcmo5Um]

Reactions producing 2′-O-methyluridine 5-oxyacetic acid methyl ester

Name
mcmo5U:mcmo5Um

Publications

Title Authors Journal Details PubMed Id DOI
Biogenesis and growth phase-dependent alteration of 5-methoxycarbonylmethoxyuridine in tRNA anticodons Sakai Y, Miyauchi K, Kimura S, Suzuki T. Nucleic Acids Res. [details] 26681692 10.1093/nar/gkv1470

Last modification of this entry: 2017-04-04 15:07:19.433307
Edited by a user: pboccaletto
Edited content: Changed formula, formula_html, mass_monoiso and mass_avg.