Modification Summary

N4,2′-O-dimethylcytidine

[show modification pathway]
m4Cm

Summary

Full nameN4,2′-O-dimethylcytidine
Short namem4Cm
New Nomenclature04C
RNAMods abbreviationλ
HTML abbreviationλ
Enzymes RsmI (Escherichia coli)
RsmH (Escherichia coli)
Found in phylogenyEubacteria
Found in RNArRNA
SMILES codeC3(OC(CO)C(O)C(O(C))3)N1C=CC(N(C))=NC1(=O)

LC-MS Information

Sum formulaC11O5N3H17
Monoisotopic mass271.11682
Average mass271.273689
HRMS mass271.116271
Normalized LC elution time
LC elution order/characteristics
LC literature references
MS Data File
MS/MS Data File
MS/MS/MS (base ion) Data File
MS literature references

Download [.mol file for m4Cm]

Chemical groups contained

methyl groupmethyl at O2
methyl groupmethyl at other N

Reactions producing N4,2′-O-dimethylcytidine

Name
m4C:m4Cm
Cm:m4Cm

Reactions starting from N4,2′-O-dimethylcytidine

Name
m4Cm:m4,4Cm

Occurrence in PDB structures

PDB-ID chain residue
2i1c y 4OC /1402

Last modification of this entry: 2013-05-10 16:37:03.746843
Edited by a user: magda
Edited content: Kingdom/s added to a modification