Modification Summary

1-methylpseudouridine

[show modification pathway]
m1Y

Summary

Full name1-methylpseudouridine
Short namem1Y
New Nomenclature19U
RNAMods abbreviation]
HTML abbreviation]
Enzymes Nep1 (Saccharomyces cerevisiae)
Nep1 (Methanocaldococcus jannaschii)
TrmY (Haloferax volcanii)
TrmY (Methanocaldococcus jannaschii)
Found in phylogenyArchaea, Eukaryota
Found in RNArRNA, tRNA
SMILES codeC3(OC(CO)C(O)C(O)3)C1=CN(C)C(=O)NC1(=O)

LC-MS Information

Sum formulaC10O6N2H14
Monoisotopic mass258.085186
Average mass258.231306
HRMS mass258.084637
Normalized LC elution time * not available
LC elution order/characteristics not available
Mass transition not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for m1Y]

Chemical groups contained

methyl groupmethyl at aromatic N
ring modificationpseudouridine

Reactions producing 1-methylpseudouridine

Name
Y:m1Y

Reactions starting from 1-methylpseudouridine

Name
m1Y:m1acp3Y

Last modification of this entry: 2013-05-10 16:36:51.502646
Edited by a user: magda
Edited content: Kingdom/s added to a modification