Modification Summary

5-formyl-2′-O-methylcytidine

[show modification pathway]
f5Cm

Summary

Full name5-formyl-2′-O-methylcytidine
Short namef5Cm
New Nomenclature071C
RNAMods abbreviation°
HTML abbreviation°
Enzymes
Found in phylogeny
Found in RNAtRNA
SMILES codeC3(OC(CO)C(O)C(O(C))3)N1C=C(C(=O))C(N)=NC1(=O)

LC-MS Information

Sum formulaC11O6N3H15
Monoisotopic mass285.0961
Average mass285.257
[M+H]+286.1039
Product ions140
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for f5Cm]

Chemical groups contained

methyl groupmethyl at O2
otherformyl

Reactions producing 5-formyl-2′-O-methylcytidine

Name
f5C:f5Cm
Cm:f5Cm

Last modification of this entry: 2017-10-06 19:48:08.137239
Edited by a user: pboccaletto
Edited content: Changed mass_prot and product_ions.