Modification Summary

5-carboxymethylaminomethyluridine

[show modification pathway]
cmnm5U

Summary

Full name5-carboxymethylaminomethyluridine
Short namecmnm5U
New Nomenclature51U
RNAMods abbreviation!
HTML abbreviation!
Enzymes MnmE (Escherichia coli)
MnmE (Chlorobium tepidum)
MnmE (Nostoc sp.)
MnmE (Thermotoga maritima)
MnmG (Escherichia coli)
MnmG (Chlorobium tepidum)
MnmG (Aquifex aeolicus)
Mss1 (Saccharomyces cerevisiae)
Mto1 (Saccharomyces cerevisiae)
Found in phylogenyEubacteria, Eukaryota
Found in RNAtRNA
PubChem ID194306
SMILES codeC3(OC(CO)C(O)C(O)3)N1C=C(CNCC(=O)O)C(=O)NC1(=O)

LC-MS Information

Sum formulaC12O8N3H17
Monoisotopic mass331.101564
Average mass331.28264
HRMS mass331.101015
Normalized LC elution time * not available
LC elution order/characteristics not available
Mass transition not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for cmnm5U]

Chemical groups contained

aminoacyl groupglycyl
methyl groupmethyl at aromatic C
othersecondary amine

Reactions producing 5-carboxymethylaminomethyluridine

Name
U:cmnm5U

Reactions starting from 5-carboxymethylaminomethyluridine

Name
cmnm5U:nm5U
cmnm5U:cmnm5Um
cmnm5U:cmnm5s2U

Last modification of this entry: 2013-05-10 16:36:57.894302
Edited by a user: magda
Edited content: Kingdom/s added to a modification