Modification Summary

3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine

[show modification pathway]
acp3D

Summary

Full name3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine
Short nameacp3D
New Nomenclature308U
RNAMods abbreviationÐ
HTML abbreviationÐ
Enzymes
Found in phylogeny
Found in RNAtRNA
SMILES codeNC(CCN1C(=O)CCN(C2OC(CO)C(O)C2O)C1=O)C(O)=O

LC-MS Information

Sum formulaC13H21N3O8
Monoisotopic mass347.1329
Average mass347.3252
[M+H]+348.1407
Product ions216
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Download [.mol file for acp3D]

Chemical groups contained

aminoacyl groupaspartyl

Reactions producing 3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine

Name
D:acp3D

Publications

Title Authors Journal Details PubMed Id DOI
3-(3-amino-3-carboxypropyl)-5,6-Dihydrouridine is one of two novel post-transcriptional modifications in tRNA(Lys) (UUU) from Trypanosoma brucei. Krog JS, Espanol Y, Giessing AM, Dziergowska A, Malkiewicz A, Ribas de Pouplana L, Kirpekar F FEBS J [details] 22040320 -

Last modification of this entry: 2017-10-06 15:58:48.963525
Edited by a user: pboccaletto
Edited content: Changed mass_prot.